| Saturday 12th August 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 0-1 | Padiham | Att: 1 |
| Tuesday 15th August 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 1-1 | Ashton Town | Att: 1 |
| Saturday 19th August 2006 | Second Division | ||
|---|---|---|---|
| Ashton Athletic | 1-2 | Bootle | Att: 2 |
| Saturday 26th August 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 1-2 | New Mills | Att: 2 |
| Saturday 9th September 2006 | F.A. Carlsberg Vase 1st Qualifying Round | ||
|---|---|---|---|
| Salford City | 6-2 | Bootle | Att: 82 |
| Tuesday 12th September 2006 | Second Division | ||
|---|---|---|---|
| Ashton Town | 0-0 | Bootle | Att: 0 |
| Saturday 16th September 2006 | Second Division | ||
|---|---|---|---|
| Leek CSOB | 1-0 | Bootle | Att: 0 |
| Saturday 23rd September 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 4-0 | Ashton Athletic | Att: 0 |
| Saturday 30th September 2006 | Second Division | ||
|---|---|---|---|
| Norton United | 1-6 | Bootle | Att: 6 |
| Saturday 7th October 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 3-1 | Castleton Gabriels | Att: 1 |
| Saturday 21st October 2006 | Second Division | ||
|---|---|---|---|
| Chadderton | 1-1 | Bootle | Att: 1 |
| Saturday 28th October 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 2-1 | Daisy Hill | Att: 1 |
| Saturday 4th November 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 2-2 | Cheadle Town | Att: 2 |
| Saturday 11th November 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 1-0 | Darwen | Att: 0 |
| Saturday 18th November 2006 | Second Division | ||
|---|---|---|---|
| Padiham | 3-2 | Bootle | Att: 2 |
| Saturday 23rd December 2006 | Second Division | ||
|---|---|---|---|
| Cheadle Town | 1-2 | Bootle | Att: 2 |
| Tuesday 26th December 2006 | Second Division | ||
|---|---|---|---|
| Bootle | 1-1 | Runcorn Linnets | Att: 1 |
| Saturday 6th January 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 3-2 | Norton United | Att: 2 |
| Saturday 27th January 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 3-4 | Winsford United | Att: 4 |
| Saturday 10th February 2007 | Second Division | ||
|---|---|---|---|
| Blackpool Mechanics | 0-1 | Bootle | Att: 1 |
| Wednesday 7th March 2007 | Second Division | ||
|---|---|---|---|
| Daisy Hill | 1-1 | Bootle | Att: 1 |
| Saturday 10th March 2007 | Second Division | ||
|---|---|---|---|
| Holker Old Boys | 1-1 | Bootle | Att: 1 |
| Tuesday 13th March 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 2-0 | Leek CSOB | Att: 0 |
| Saturday 17th March 2007 | Second Division | ||
|---|---|---|---|
| Castleton Gabriels | 0-7 | Bootle | Att: 7 |
| Wednesday 21st March 2007 | Second Division | ||
|---|---|---|---|
| Eccleshall | 1-0 | Bootle | Att: 0 |
| Saturday 31st March 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 1-2 | Chadderton | Att: 2 |
| Wednesday 4th April 2007 | Second Division | ||
|---|---|---|---|
| Oldham Town | 2-1 | Bootle | Att: 1 |
| Saturday 7th April 2007 | Second Division | ||
|---|---|---|---|
| Runcorn Linnets | 2-0 | Bootle | Att: 0 |
| Monday 9th April 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 2-0 | Holker Old Boys | Att: 0 |
| Saturday 14th April 2007 | Second Division | ||
|---|---|---|---|
| Darwen | 4-0 | Bootle | Att: 0 |
| Monday 16th April 2007 | Second Division | ||
|---|---|---|---|
| New Mills | 5-3 | Bootle | Att: 3 |
| Thursday 19th April 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 1-1 | Oldham Town | Att: 1 |
| Saturday 21st April 2007 | Second Division | ||
|---|---|---|---|
| Winsford United | 3-1 | Bootle | Att: 1 |
| Tuesday 24th April 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 2-1 | Blackpool Mechanics | Att: 1 |
| Saturday 28th April 2007 | Second Division | ||
|---|---|---|---|
| Bootle | 6-2 | Eccleshall | Att: 2 |
